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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs71375442 chr17:36214153 T/G TBC1D3B chr17:34493061-34503996:- -0.5 -8.26 1.48E-15 Box Plot
THCA rs71383357 chr17:36228779 G/C TBC1D3B chr17:34493061-34503996:- -0.49 -8.01 8.86E-15 Box Plot
THCA rs71384207 chr17:36436032 C/A TBC1D3B chr17:34493061-34503996:- -0.49 -7.44 4.83E-13 Box Plot
THCA rs71384208 chr17:36444820 C/T TBC1D3B chr17:34493061-34503996:- -0.48 -7.16 3.16E-12 Box Plot
THCA rs714040 chr2:101064803 A/G LOC285359 chr3:101431278-101432259:+ 0.35 7.96 1.25E-14 Box Plot
THCA rs7140641 chr14:39972614 T/A LOC647288 chr13:75811890-75814517:- -0.51 -9.55 6.94E-20 Box Plot
THCA rs71407786 chr14:39894494 T/C LOC647288 chr13:75811890-75814517:- -0.55 -6.27 8.22E-10 Box Plot
THCA rs71407788 chr14:39913298 C/G LOC647288 chr13:75811890-75814517:- -0.48 -8.67 7.02E-17 Box Plot
THCA rs71407789 chr14:39913414 C/G LOC647288 chr13:75811890-75814517:- -0.48 -8.67 7.02E-17 Box Plot
THCA rs71407790 chr14:39913543 C/T LOC647288 chr13:75811890-75814517:- -0.48 -8.7 5.45E-17 Box Plot
THCA rs7140983 chr14:39907408 A/G LOC647288 chr13:75811890-75814517:- -0.49 -8.86 1.64E-17 Box Plot
THCA rs71414672 chr2:113276539 A/C RGPD5 chr2:110550335-110615272:+ -0.49 -6.77 3.72E-11 Box Plot
THCA rs71414673 chr2:113285621 G/A RGPD5 chr2:110550335-110615272:+ -0.51 -7.14 3.39E-12 Box Plot
THCA rs71425418 chr2:92051257 T/C ZNF514 chr2:95813075-95831158:- -0.34 -6.5 2.05E-10 Box Plot
THCA rs71425424 chr2:92095460 T/C ZNF514 chr2:95813075-95831158:- -0.34 -6.5 2.05E-10 Box Plot